ATTENTION ⚠️
On Saturday April 20th, 2024 at 8:00 AM (UTC), emergency site maintenance has been scheduled for iLab DFCI. Details and updates can be found on the Agilent Status Page. For additional information, please contact the Agilent iLab Support by clicking on 'Help' at the top of your account page or by emailing ilab-support@agilent.com.
The Microarray Core Facility offers Gene Expression Profiling, SNP, miRNA, and CNV analysis using Affymetrix microarray technologies.
The Core specializes in handling and processing RNA extracted from Formalin-Fixed Parafin embedded tissue (FFPE).
Contact Us with questions or to discuss your project
Location – "Fish Room" near 3rd floor elevator lobby of the Smith Building. Next to the multicolored fish sculpture.
Entry –
If you are a DFCI employee, use your DFCI ID card to enter the room.
If you are not a DFCI employee, first obtain a Visitor Pass at the Security Desk in the Smith Building lobby, then dial 2-3131 on the red phone near SM300, and ask for SM300 to be unlocked.
Hours | Location |
Monday-Friday |
21-27 Burlington Ave. 4th floor |
Purchase Orders are to be made out to:
Dana Farber Cancer Institute
General Accounting, BP-425
450 Brookline Avenue
Boston, MA 02215-5450
Note to Partners, Harvard, Boston Children’s and Tufts researchers:
If you are using a PO from an institution other than one under which you signed in, you must stop and contact the DFCI iLab staff at sc_billing@dfci.harvard.edu
http://macf-web.dfci.harvard.edu/
Name | Role | Phone | Location | |
---|---|---|---|---|
Zach Herbert |
Associate Director Genomics Core Facility
|
617-632-3082
|
zherbert@mail.dfci.harvard.edu
|
|
Maura Berkeley |
Lab Supervisor
|
maura_berkeley@dfci.harvard.edu
|
||
Paul Morrison |
Director
|
617-632-3082
|
paul_morrison@dfci.harvard.edu
|
Fixed Cost Services |
► 3' Array Low Input (9) | |||
Name | Description | Price | |
---|---|---|---|
Drosophila Genome 2.0 |
Sample Preparation: NuGEN Ovation V2 Sample Requirement: 5ng-30ng (minimum requires very high quality RNA) More information: Datasheet
|
Inquire | |
Human Genome U133A 2.0 |
Sample Preparation: NuGEN Ovation V2 Sample Requirement: 5ng-30ng (minimum requires very high quality RNA) More information: Datasheet
|
Inquire | |
Human Genome U133Plus 2.0 |
Sample Preparation: NuGEN Ovation V2 Sample Requirement: 5ng-30ng (minimum requires very high quality RNA) More information: Datasheet
|
Inquire | |
Mouse Genome 430 2.0 |
Sample Preparation: NuGEN Ovation V2 Sample Requirement: 5ng-30ng (minimum requires very high quality RNA) More information: Datasheet
|
Inquire | |
Mouse Genome 430A 2.0 |
Sample Preparation: NuGEN Ovation V2 Sample Requirement: 5ng-30ng (minimum requires very high quality RNA) More information: Datasheet |
Inquire | |
PrimeView |
Sample Preparation: NuGEN Ovation V2 Sample Requirement: 5ng-30ng (minimum requires very high quality RNA) More information: Datasheet
|
Inquire | |
Rat Genome 230 2.0 |
Sample Preparation: NuGEN Ovation V2 Sample Requirement: 5ng-30ng (minimum requires very high quality RNA) More information: Datasheet
|
Inquire | |
Yeast Genome 2.0 |
Sample Preparation:NuGEN Ovation V2 Sample Requirement: 5ng-30ng (minimum requires very high quality RNA) |
Inquire | |
Zebrafish Genome |
Sample Preparation: NuGEN Ovation V2 Sample Requirement: 5ng-30ng (minimum requires very high quality RNA) More information: Datasheet
|
Inquire | |
► 3' Arrays (9) | |||
Name | Description | Price | |
Drosophila Genome 2.0 |
Sample requirement: 300ng (100ng minimum)
More information: Datasheet |
Inquire | |
Human Genome U133A 2.0 |
More information: Datasheet
|
Inquire | |
Human Genome U133Plus 2.0 |
More information: Datasheet
|
Inquire | |
Mouse Genome 430 2.0 |
More information: Datasheet |
Inquire | |
Mouse Genome 430A 2.0 |
Sample requirement: 300ng (100ng minimum)
More information: Datasheet |
Inquire | |
PrimeView |
Sample requirement: 300ng (100ng minimum)
More information: Datasheet
|
Inquire | |
Rat Genome 230 2.0 |
Sample requirement: 300ng (100ng minimum)
More information: Datasheet
|
Inquire | |
Yeast Genome 2.0 |
Sample requirement: 300ng (100ng minimum)
More information: Datasheet
|
Inquire | |
Zebrafish Genome |
Sample requirement: 300ng (100ng minimum)
More information: Datasheet
|
Inquire | |
► FFPE Whole Transcript - Affymetrix SensationPlus (7) | |||
Name | Description | Price | |
Human Exon 1.0 ST |
Sample requirement: less than 50ng FFPE total RNA
|
Inquire | |
Human Gene 1.0 ST |
Sample requirement: less than 50ng FFPE total RNA
|
Inquire | |
Human Gene 2.0 ST |
Sample requirement: less than 50ng FFPE total RNA
|
Inquire | |
Human Transcriptome Array (HTA) 2.0 |
Sample requirement: less than 50ng FFPE total RNA
|
Inquire | |
Mouse Exon 1.0 ST |
Sample requirement: less than 50ng FFPE total RNA
|
Inquire | |
Mouse Gene 1.0 ST |
Sample requirement: less than 50ng FFPE total RNA
|
Inquire | |
Mouse Gene 2.0 ST |
Sample requirement: less than 50ng FFPE total RNA
|
Inquire | |
► FFPE Whole Transcript - NuGEN (9) | |||
Name | Description | Price | |
Human Exon 1.0 ST |
Sample requirement: 50 - 100ng FFPE total RNA
|
Inquire | |
Human Gene 1.0 ST |
Sample requirement: 50 - 100ng FFPE total RNA
|
Inquire | |
Human Gene 2.0 ST |
Sample requirement: 50 - 100ng FFPE total RNA
|
Inquire | |
Human Transcriptome Array (HTA) 2.0 |
Sample requirement: 50 - 100ng FFPE total RNA
|
Inquire | |
Mouse Exon 1.0 ST |
Sample requirement: 50 - 100ng FFPE total RNA
|
Inquire | |
Mouse Gene 1.0 ST |
Sample requirement: 50 - 100ng FFPE total RNA
|
Inquire | |
Mouse Gene 2.0 ST |
Sample requirement: 50 - 100ng FFPE total RNA
|
Inquire | |
Rat Gene 1.0 ST |
Sample requirement: 50 - 100ng FFPE total RNA
|
Inquire | |
Rat Gene 2.0 ST |
Sample requirement: 50 - 100ng FFPE total RNA
|
Inquire | |
► Other (1) | |||
Name | Description | Price | |
Custom processing | Inquire | ||
► QC only (4) | |||
Name | Description | Price | |
DNA - Bioanalyzer 12000 |
x ng/uL, submit 5 uL |
Inquire | |
DNA Bioanalyzer - High Sensitivity |
x ng/uL, submit 5 uL |
Inquire | |
RNA - Bioanalyzer Nano |
x ng/uL, submit 5 uL |
Inquire | |
RNA - Bioanalyzer Pico |
x ng/uL, submit 5 uL
|
Inquire | |
► SNP Arrays (4) | |||
Name | Description | Price | |
Genome-Wide Human SNP 6.0 |
Sample requirement: 600ng* genomic DNA supplied at 50ng/uL
(*minimum 500ng supplied at 50ng/uL)
|
Inquire | |
Human Cytoscan HD |
Sample requirement: 400ng* genomic DNA supplied at 50ng/uL
(*minimum 250ng supplied at 50ng/uL)
More information: Datasheet |
Inquire | |
Human Mapping 250K - Nsp |
Sample requirement: 400ng* genomic DNA supplied at 50ng/uL
(*minimum 250ng supplied at 50ng/uL)
More information: Datasheet
|
Inquire | |
Mouse Diversity Genotyping |
Sample requirement: 600ng* genomic DNA supplied at 50ng/uL
(*minimum 500ng supplied at 50ng/uL)
More Information: Datasheet |
Inquire | |
► Whole Transcript Arrays (11) | |||
Name | Description | Price | |
Human Exon 1.0 ST |
Sample requirement: 300ng (minimum 100ng)
More information: Datasheet
|
Inquire | |
Human Gene 1.0 ST |
Sample requirement: 300ng (minimum 100ng)
More information: Datasheet |
Inquire | |
Human Gene 2.0 ST |
Sample requirement: 300ng (minimum 100ng)
More information: Datasheet
|
Inquire | |
Human Transcriptome Array (HTA) 2.0 |
Sample requirement: 300ng (minimum 100ng)
More information:Datasheet
|
Inquire | |
Mouse Exon 1.0 ST |
Sample requirement: 300ng (minimum 100ng)
|
Inquire | |
Mouse Gene 1.0 ST |
Sample requirement: 300ng (minimum 100ng)
More information: Datasheet
|
Inquire | |
Mouse Gene 2.0 ST |
Sample requirement: 300ng (minimum 100ng)
More information: Datasheet
|
Inquire | |
Mouse Transcriptome Array | Inquire | ||
Rat Gene 1.0 ST |
Sample requirement: 300ng (minimum 100ng)
More information: Datasheet
|
Inquire | |
Rat Gene 2.0 ST |
Sample requirement: 300ng (minimum 100ng)
More information: Datasheet
|
Inquire | |
Zebrafish Gene 1.0 ST |
Sample requirement: 300ng (minimum 100ng)
More information: Datasheet
|
Inquire | |
► Whole Transcript Arrays - Low Input (9) | |||
Name | Description | Price | |
Human Exon 1.0 ST |
Affy Pico WTA
Sample Requirement: Less than 50ng total RNA
More Information: Datasheet |
Inquire | |
Human Gene 1.0 ST |
NuGEN Pico WTA
Sample Requirement: Less than 50ng total RNA
More Information: Datasheet |
Inquire | |
Human Gene 2.0 ST |
NuGEN Pico WTA
Sample Requirement: Less than 50ng total RNA
More Information: Datasheet
|
Inquire | |
Human Transcriptome Array (HTA) 2.0 |
NuGEN Pico WTA
Sample Requirement: Less than 50ng total RNA
More Information: Datasheet |
Inquire | |
Mouse Exon 1.0 ST |
NuGEN Pico WTA
Sample Requirement: Less than 50ng total RNA
More Information: Datasheet |
Inquire | |
Mouse Gene 1.0 ST |
NuGEN Pico WTA
Sample Requirement: Less than 50ng total RNA
More Information: Datasheet |
Inquire | |
Mouse Gene 2.0 ST |
NuGEN Pico WTA
Sample Requirement: Less than 50ng total RNA
More Information: Datasheet |
Inquire | |
Rat Gene 1.0 ST |
NuGEN Pico WTA
Sample Requirement: Less than 50ng total RNA
More information: Datasheet |
Inquire | |
Rat Gene 2.0 ST |
NuGEN Pico WTA
Sample Requirement: Less than 50ng total RNA
More information: Datasheet |
Inquire | |
► miRNA Array (1) | |||
Name | Description | Price | |
miRNA 4.0 Array | Inquire |
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Click on this map for specific directions to and from Logan Airport and the Mass Pike as well as a good place to eat while visiting MBCF.